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GeneTraffic 2.6-25
* corrected problem creating Gene Tables from a Gene List and selection of Hybridization
Groups
* corrected problem saving results from Cluster Visualization
* corrected problem with hybridization statistics plot scales being displayed
incorrectly
* corrected internet latency issues involved in viewing the Data Manager
* corrected an issue with performing set operations on groups of Gene Lists
* corrected problem exporting files
* corrected problem deleting data structures from the Data Manager
* corrected problem with incorrect number of results displaying in Gene Search
* corrected problem with uploading external data files through the data manager
(Gene Lists and Gene Tables)
* further improved memory management and performance on Gene List functionality
* corrected problem loading Affymetrix E-Coli Antisense .cel files and choosing
RMA as the analysis method
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GeneTraffic 2.6-22
* included support for Affymetrix GeneChip(R) Rat Expression Set 230
* included support for Affymetrix GeneChip(R) Mouse Expression Set 430
* included support for Affymetrix GeneChip(R) MGU74Av1 chips
* included support for Imagene MultiGrid quantified data files
* included support for MediaCybernetics ArrayPro 4.5 files with ability to
import original tif images
* improved memory management and performance on Gene List functionality
* corrected problem saving settings and views in cluster visualization
* corrected problem uploading of external clusters to the data manager
* improved problem with long running activities being terminated by the system
at 4:00am
* corrected internet latency issues involved in trying to start the batch load
process
* corrected an issue with uploading large Gene Lists
* corrected an issue with re-processing one color datasets after changing the
baseline or the analysis method
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GeneTraffic
2.6-16
* improved file transfer capabilities
* removed the 200 MB limit on file size for transferring
* improved one-color data loading including built in annotation for all of
the supported chip types
* improved processing speed on one-color data analysis - specifically RMA
* added support for extracting the MAS 5.0 signal from .chp files (exported
pivot tables are no longer required or supported)
* improved 2 color data loading and intelligent file type selection
* added support for ScanArray Express and ArrayPro file types
* improved system feedback on the project navigation screen
* complete redesign and improvement for data management and analysis (spot
and gene tables, gene lists, and clusters)
* improved data management tree
* improved clustering speed and robustness
* improved cluster visualization (visible annotation, customizable fonts and
colors, and the ability to modify the order of the headers)
* gene annotation is now available in spot and gene tables
* improved ActiveX detection and installation
* corrected the inability to change titles in the scatterplot visualization
section
* improved file support and detection for numerous types including Imagene,
GenePix and Agilent
* corrected problems clustering less than three clusters
* corrected defect with display of dendrogram for clustering two groups
* corrected the inability to save cluster views
* upgraded Linux to a Journaling File System (ext2 to ext3)
* cluster visualization issues
* apache upgrade
* R upgrade
* upgrade license functionality
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GeneTraffic
2.5-30
* Fixed restore bug
* Added Agilent 6 support
* Added Genepix 4.1 support
* Scatterplot improvement
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GeneTraffic
2.5-29
* Spot view now provides three spots to compensate for poor or low intensity
images when viewing
* Queuing improvement: tasks start at once
* Fixed spot query download for large results hangs
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GeneTraffic 2.5-28
* Fixed NFS startup/shutdown
* Fixed zip_file_status and hyb_pending_status in case of accidental reboot
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GeneTraffic
2.5-27
* Added support for Imagene 4.2 and Imagene 5.0
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